STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1438Transcriptional regulator, IclR family. (292 aa)    
Predicted Functional Partners:
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
  
  
  0.703
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
  
    0.684
CSIRO_1441
3-ketoacyl-CoA thiolase@ Acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.679
CSIRO_4179
Transcriptional regulator, IclR family.
  
     0.668
CSIRO_1439
Bifunctional; enoyl-CoA hydratase/ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.581
CSIRO_1440
long-chain-fatty-acid--CoA ligase.
   
   0.580
CSIRO_1442
acyl-CoA dehydrogenase, long-chain specific.
 
  
  0.578
CSIRO_2425
Biotin carboxylase.
  
  
  0.485
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
  
    0.484
CSIRO_4229
Transcriptional regulator, IclR family.
  
     0.484
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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