Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1438Transcriptional regulator, IclR family. (292 aa)    
Predicted Functional Partners:
CSIRO_1439
Bifunctional; enoyl-CoA hydratase/ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.678
CSIRO_1441
3-ketoacyl-CoA thiolase@ Acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.675
CSIRO_4179
Transcriptional regulator, IclR family.
  
     0.668
CSIRO_2812
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
  0.653
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
  
    0.636
CSIRO_1440
long-chain-fatty-acid--CoA ligase.
   
   0.615
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
  
    0.611
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
  
  
  0.580
CSIRO_1442
acyl-CoA dehydrogenase, long-chain specific.
 
  
  0.564
CSIRO_1434
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
       0.518
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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