STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1481Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (392 aa)    
Predicted Functional Partners:
CSIRO_1480
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.977
CSIRO_1482
Urea ABC transporter, ATPase protein.
 
 0.971
CSIRO_1483
Urea ABC transporter, ATPase protein.
 
 
  0.951
CSIRO_1479
Urea ABC transporter, urea binding protein.
 
 
  0.948
CSIRO_1999
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.905
CSIRO_1998
Urea ABC transporter, urea binding protein.
 
 
  0.876
CSIRO_2001
Urea ABC transporter, ATPase protein.
 
 0.864
CSIRO_2002
Urea ABC transporter, ATPase protein.
 
 
  0.825
CSIRO_1893
Putative urea/short-chain amide transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.760
CSIRO_1239
Benzoate transport protein, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.702
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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