STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1552Hypothetical protein. (346 aa)    
Predicted Functional Partners:
CSIRO_1553
Putative 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
       0.800
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
  
  
  0.693
CSIRO_3963
Hypothetical protein.
  
  0.673
CSIRO_1554
glutamyl-Q-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.594
CSIRO_2234
Cytochrome P450.
   
 
 0.593
CSIRO_2231
Hypothetical protein.
  
 
  0.578
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
   
 0.550
CSIRO_2258
Fatty acid desaturase.
  
  
  0.546
CSIRO_1190
Saccharopine dehydrogenase.
 
     0.508
CSIRO_1555
Two-component hybrid sensor and regulator.
     
 0.501
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.