STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduOcob(I)alamin adenosyltransferase PduO; Belongs to the Cob(I)alamin adenosyltransferase family. (196 aa)    
Predicted Functional Partners:
CSIRO_1557
Hypothetical protein.
  
    0.717
hisC
Biosynthetic aromatic amino acid aminotransferase beta; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.680
CSIRO_1448
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.673
cobT
Aerobic cobaltochelatase, CobT subunit.
    
  0.616
CSIRO_1559
Electron transfer flavoprotein beta subunit.
       0.552
CSIRO_1560
Electron transfer flavoprotein alpha subunit.
       0.552
CSIRO_1556
Ribonuclease BN.
       0.533
CSIRO_2327
methylmalonyl-CoA mutase.
 
   
 0.509
CSIRO_2329
methylmalonyl-CoA mutase.
 
   
 0.462
CSIRO_1411
Nitroreductase-like protein.
    
  0.458
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.