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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1568Transcriptional regulator, ArsR family. (149 aa)    
Predicted Functional Partners:
CSIRO_1567
Putative glutathione S-transferase-related transmembrane protein.
 
    0.835
CSIRO_1576
Putative glutathione S-transferase-related transmembrane protein.
 
    0.769
CSIRO_2565
Putative glutathione S-transferase-related transmembrane protein.
 
    0.747
tlpA
Thiol:disulfide oxidoreductase TlpA.
       0.590
CSIRO_1566
RNA signal recognition particle 4.5S RNA.
       0.556
CSIRO_0304
Putative glutathione S-transferase-related transmembrane protein.
 
    0.534
CSIRO_1565
3-demethylubiquinone-9 3-methyltransferase.
       0.473
argH
Argininosuccinate lyase.
       0.417
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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