Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_16112-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (297 aa)    
Predicted Functional Partners:
CSIRO_2926
Hypothetical protein.
      0.839
CSIRO_2262
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
 
  0.808
CSIRO_4042
Putative decarboxylase.
  
 
 0.795
CSIRO_1116
Glyoxylate reductase/ glyoxylate reductase/ hydroxypyruvate reductase; Bifunctional; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.751
CSIRO_2858
Fumarylacetoacetase.
  
  
 
0.741
CSIRO_1610
Glutathione S-transferase-like protein.
  
 
  0.728
CSIRO_3881
Fumarylacetoacetate hydrolase.
  
  
 
0.720
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.708
ureA
Urease gamma subunit; Belongs to the urease gamma subunit family.
     
  0.700
ureB
Urease beta subunit; Belongs to the urease beta subunit family.
     
  0.700
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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