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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_16112-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (297 aa)    
Predicted Functional Partners:
CSIRO_2926
Hypothetical protein.
 
   
  0.878
CSIRO_2262
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
  0.725
CSIRO_4042
Putative decarboxylase.
  
 
 0.702
CSIRO_1610
Glutathione S-transferase-like protein.
  
 
  0.696
CSIRO_1116
Glyoxylate reductase/ glyoxylate reductase/ hydroxypyruvate reductase; Bifunctional; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.672
CSIRO_3998
5-carboxymethyl-2-hydroxymuconate delta isomerase.
  
 
 0.668
CSIRO_2858
Fumarylacetoacetase.
  
  
 
0.643
CSIRO_3947
Fe-S protein.
    
  0.641
CSIRO_1612
Beta-lactamase-like protein.
  
    0.624
CSIRO_1613
Dehydrogenase.
  
  0.621
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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