Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1624Hypothetical protein. (194 aa)    
Predicted Functional Partners:
CSIRO_1625
Hypothetical protein.
 
    
0.868
CSIRO_3346
Abortive infection protein.
  
    0.747
CSIRO_0317
Hypothetical protein.
  
     0.732
CSIRO_4011
Hypothetical protein.
  
     0.718
crcB
CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.694
CSIRO_1023
Hypothetical protein.
  
     0.687
CSIRO_3809
Hypothetical protein.
  
     0.664
CSIRO_2695
Multicopper oxidase.
  
  
 0.628
CSIRO_3508
Hypothetical protein.
  
     0.621
znuC
Zinc ABC transporter ATP-binding protein ZnuC.
       0.577
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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