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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuCZinc ABC transporter ATP-binding protein ZnuC. (250 aa)    
Predicted Functional Partners:
znuB
Zinc ABC transporter inner membrane permease protein ZnuB.
 
 0.999
znuA
Zinc ABC transporter periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
CSIRO_1626
Hypothetical protein.
       0.800
modB
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.666
modA
Molybdenum ABC transporter molybdenum-binding protein ModA; Periplasmic.
     
 0.652
ccmC
Cytochrome c-type biogenesis protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
 
  0.606
CSIRO_1624
Hypothetical protein.
       0.573
CSIRO_1630
Putative zinc chaperone.
     
 0.551
CSIRO_1631
WD-40 repeat-containing protein.
       0.517
CSIRO_1625
Hypothetical protein.
       0.515
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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