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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuBZinc ABC transporter inner membrane permease protein ZnuB. (289 aa)    
Predicted Functional Partners:
znuC
Zinc ABC transporter ATP-binding protein ZnuC.
 
 0.999
znuA
Zinc ABC transporter periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
CSIRO_1626
Hypothetical protein.
       0.800
CSIRO_1325
Threonine synthase.
    
  0.595
mntH
Manganese transport protein MntH.
   
  
 0.579
mntH-2
Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.579
CSIRO_0574
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component.
 
  
 0.573
CSIRO_1624
Hypothetical protein.
       0.573
CSIRO_1630
Putative zinc chaperone.
  
  
 0.564
CSIRO_2091
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.547
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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