STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1649Putative activity regulator of membrane protease. (147 aa)    
Predicted Functional Partners:
CSIRO_1648
Putative stomatin/prohibitin-family membrane protease subunit.
 
  
 0.959
CSIRO_1050
Succinate dehydrogenase hydrophobic membrane anchor protein.
  
     0.552
hemH
Protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.536
CSIRO_1198
Hypothetical protein.
   
    0.447
CSIRO_1646
Putative membrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.433
CSIRO_2755
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
    0.428
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.