STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1680Ectoine hydroxylase. (266 aa)    
Predicted Functional Partners:
CSIRO_0471
Glycolate dehydrogenase.
   
 0.750
CSIRO_0472
Glycolate dehydrogenase.
   
 0.750
CSIRO_1803
D-2-hydroxyglutarate dehydrogenase.
   
 0.750
CSIRO_2033
Alkyldihydroxyacetonephosphate synthase.
   
 0.750
CSIRO_3947
Fe-S protein.
   
 0.750
CSIRO_4043
D-Lactate dehydrogenase, cytochrome c-dependent.
   
 0.750
CSIRO_4200
Glycolate dehydrogenaseFAD-binding subunit.
   
 0.750
glcD
Glycolate dehydrogenase.
   
 0.750
CSIRO_4204
Alkyldihydroxyacetonephosphate synthase.
   
 0.750
CSIRO_0517
3-ketoacyl-CoA thiolase/ acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.735
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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