STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1685Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)    
Predicted Functional Partners:
CSIRO_1686
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.965
CSIRO_1687
Transcriptional regulator, TetR family.
 
   
 0.745
CSIRO_3098
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.720
CSIRO_2047
RND efflux system protein.
  
  0.706
CSIRO_2056
RND efflux system protein.
  
  0.705
CSIRO_2307
Cobalt-zinc-cadmium resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.702
cmeB
RND efflux system CmeB.
  
  0.686
CSIRO_2164
Acriflavin resistance protein.
  
  0.686
CSIRO_2990
Type I secretion outer membrane protein.
 
 0.683
CSIRO_2308
TolC precursor.
 
 0.669
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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