Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1727Dienelactone hydrolase family. (224 aa)    
Predicted Functional Partners:
CSIRO_1728
Hypothetical protein.
       0.837
CSIRO_1176
Dienelactone hydrolase family.
  
  
 
0.820
CSIRO_1726
Monooxygenase domain-containing protein.
  
    0.776
CSIRO_1724
Bile acid transporter family protein.
       0.767
CSIRO_1725
UDP-glucose 4-epimerase.
       0.763
CSIRO_1957
Alcohol dehydrogenase.
 
 
 0.752
CSIRO_3817
Muconate cycloisomerase.
  
 
 0.715
CSIRO_2185
Iron-containing alcohol dehydrogenase.
  
 
 0.710
CSIRO_1307
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.585
CSIRO_1439
Bifunctional; enoyl-CoA hydratase/ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.585
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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