Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1732Hypothetical protein. (223 aa)    
Predicted Functional Partners:
CSIRO_3233
Putative glycosyl transferase.
  
 
 0.909
CSIRO_1733
Hypothetical protein.
       0.740
CSIRO_3576
Putative iron-sulfur cluster assembly scaffold protein.
  
 
 0.675
CSIRO_3683
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
   
 
 0.670
CSIRO_3158
Cysteine desulfurase.
    
 0.668
CSIRO_2826
Putative iron binding protein from the HesB/IscA/SufA family; Belongs to the HesB/IscA family.
    
 0.639
CSIRO_3152
Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
    
 0.639
CSIRO_1249
Benzoyl-CoA oxygenase.
   
 0.638
CSIRO_2234
Cytochrome P450.
    
 0.631
CSIRO_2920
Assimilatory nitrate reductase large subunit.
    
 0.629
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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