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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1767Putative O-methyltransferase; Belongs to the methyltransferase superfamily. (256 aa)    
Predicted Functional Partners:
CSIRO_1766
Hypothetical protein.
       0.800
CSIRO_1765
Bifunctional; octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase (farnesyldiphosphate synthase)/ geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
       0.597
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
     0.513
CSIRO_0677
SAM-dependent methyltransferase.
  
     0.466
rsmI
rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.465
CSIRO_0256
HAD superfamily protein; Involved in N-acetyl-glucosamine catabolism.
 
     0.442
CSIRO_1768
Macromolecule degradation protein.
       0.421
CSIRO_1776
Pyruvate-phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
  0.412
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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