STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1787Putative hydrolase. (205 aa)    
Predicted Functional Partners:
CSIRO_1267
Deoxycytidine triphosphate deaminase.
  
  
 0.815
CSIRO_1789
Folate-dependent oxidative stress repair protein; Belongs to the GcvT family.
  
    0.804
CSIRO_1788
DNA-3-methyladenine glycosylase.
       0.800
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.742
CSIRO_1357
Hypothetical protein.
  
     0.733
CSIRO_0987
Hypothetical protein.
  
     0.731
hisS
histidyl-tRNA synthetase.
  
     0.705
CSIRO_0256
HAD superfamily protein; Involved in N-acetyl-glucosamine catabolism.
 
  
 0.673
surE
5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.671
CSIRO_2349
Hypothetical protein.
  
     0.646
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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