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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1810Metallo-beta-lactamase family protein. (309 aa)    
Predicted Functional Partners:
CSIRO_3426
Hypothetical protein.
 
     0.941
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
   
 0.760
CSIRO_3360
NTP pyrophosphohydrolase.
  
  
  0.634
CSIRO_4093
Hypothetical protein.
  
  0.567
CSIRO_3576
Putative iron-sulfur cluster assembly scaffold protein.
  
  
  0.524
CSIRO_2479
Acyl carrier protein.
  
 
 
 0.497
CSIRO_1809
glutaryl-CoA dehydrogenase.
  
    0.471
CSIRO_0437
Hypothetical protein.
  
     0.463
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
  0.459
CSIRO_1206
Putative metal-binding enzyme.
  
  
 
0.438
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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