CSIRO_1822 protein (Bradyrhizobiaceae bacterium SG6C)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CSIRO_1822

Oxidoreductase. (254 aa)

Predicted Functional Partners:

pdxH

0.817

CSIRO_0268

0.718

CSIRO_2928

0.681

CSIRO_1825

0.677

CSIRO_0317

0.666

acpP

0.660

CSIRO_2479

0.643

CSIRO_0272

0.615

CSIRO_1995

0.614

CSIRO_3728

0.607

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_0268	CSIRO_1822	CSIRO_0268	CSIRO_1822	Glutamate synthase (NADPH) large chain.	Oxidoreductase.	0.718
CSIRO_0268	CSIRO_1995	CSIRO_0268	CSIRO_1995	Glutamate synthase (NADPH) large chain.	Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.747
CSIRO_0268	CSIRO_2479	CSIRO_0268	CSIRO_2479	Glutamate synthase (NADPH) large chain.	Acyl carrier protein.	0.900
CSIRO_0268	acpP	CSIRO_0268	CSIRO_2617	Glutamate synthase (NADPH) large chain.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.900
CSIRO_0272	CSIRO_0317	CSIRO_0272	CSIRO_0317	TPR domain-containing protein.	Hypothetical protein.	0.904
CSIRO_0272	CSIRO_1822	CSIRO_0272	CSIRO_1822	TPR domain-containing protein.	Oxidoreductase.	0.615
CSIRO_0272	CSIRO_1825	CSIRO_0272	CSIRO_1825	TPR domain-containing protein.	DnaJ-like molecular chaperone.	0.776
CSIRO_0272	CSIRO_2479	CSIRO_0272	CSIRO_2479	TPR domain-containing protein.	Acyl carrier protein.	0.707
CSIRO_0272	CSIRO_3728	CSIRO_0272	CSIRO_3728	TPR domain-containing protein.	TolA protein.	0.853
CSIRO_0272	acpP	CSIRO_0272	CSIRO_2617	TPR domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.707
CSIRO_0317	CSIRO_0272	CSIRO_0317	CSIRO_0272	Hypothetical protein.	TPR domain-containing protein.	0.904
CSIRO_0317	CSIRO_1822	CSIRO_0317	CSIRO_1822	Hypothetical protein.	Oxidoreductase.	0.666
CSIRO_0317	CSIRO_1825	CSIRO_0317	CSIRO_1825	Hypothetical protein.	DnaJ-like molecular chaperone.	0.815
CSIRO_0317	CSIRO_3728	CSIRO_0317	CSIRO_3728	Hypothetical protein.	TolA protein.	0.959
CSIRO_1822	CSIRO_0268	CSIRO_1822	CSIRO_0268	Oxidoreductase.	Glutamate synthase (NADPH) large chain.	0.718
CSIRO_1822	CSIRO_0272	CSIRO_1822	CSIRO_0272	Oxidoreductase.	TPR domain-containing protein.	0.615
CSIRO_1822	CSIRO_0317	CSIRO_1822	CSIRO_0317	Oxidoreductase.	Hypothetical protein.	0.666
CSIRO_1822	CSIRO_1825	CSIRO_1822	CSIRO_1825	Oxidoreductase.	DnaJ-like molecular chaperone.	0.677
CSIRO_1822	CSIRO_1995	CSIRO_1822	CSIRO_1995	Oxidoreductase.	Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.614
CSIRO_1822	CSIRO_2479	CSIRO_1822	CSIRO_2479	Oxidoreductase.	Acyl carrier protein.	0.643