Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1844Metal ion dependent adhesion motif-containing protein. (277 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.715
CSIRO_3645
MobA-related protein.
  
     0.630
CSIRO_1013
GMP synthase.
  
  
  0.597
CSIRO_1766
Hypothetical protein.
  
     0.562
CSIRO_3375
Hypothetical protein.
  
     0.557
CSIRO_1365
Hypothetical protein.
  
    0.547
CSIRO_0343
Phasin 2.
  
     0.503
CSIRO_1842
Methyl-accepting chemotaxis sensory transducer.
       0.481
CSIRO_1843
Hypothetical protein.
       0.481
CSIRO_3829
Cytochrome C.
  
    0.480
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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