Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1851Glyoxalase family protein. (349 aa)    
Predicted Functional Partners:
CSIRO_4186
Carboxylesterase.
  
 0.924
CSIRO_2327
methylmalonyl-CoA mutase.
    
 0.920
CSIRO_2329
methylmalonyl-CoA mutase.
    
 0.920
CSIRO_2425
Biotin carboxylase.
  
 
 0.765
CSIRO_4093
Hypothetical protein.
  
 0.764
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
   
 0.744
CSIRO_2134
4-hydroxyphenylpyruvate dioxygenase.
    
 0.734
CSIRO_0338
Lead, cadmium, zinc and mercury transporting ATPase; Bifunctional.
    
 0.729
CSIRO_0168
L-lactate dehydrogenase.
    
 0.719
CSIRO_2199
Aldo/keto reductase.
   
 0.714
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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