Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1861NAD-dependent formate dehydrogenase delta subunit. (74 aa)    
Predicted Functional Partners:
CSIRO_1857
NAD-dependent formate dehydrogenase gamma subunit.
 
 
 0.996
CSIRO_1859
NAD-dependent formate dehydrogenase alpha subunit.
 
 0.995
CSIRO_1858
NAD-dependent formate dehydrogenase beta subunit.
 
 
 0.993
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
   
 0.991
CSIRO_1944
Tungsten-containing formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.963
CSIRO_1860
Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
 
   
 0.960
CSIRO_2724
NADH-ubiquinone oxidoreductase chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.940
CSIRO_2922
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.923
CSIRO_2722
NADH-ubiquinone oxidoreductase chain E.
   
 0.892
CSIRO_1856
Hydrogen peroxide response regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.822
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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