STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1864Fumarylacetoacetase. (441 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
 
 0.952
CSIRO_2131
Maleylacetoacetate isomerase/ glutathione S-transferase zeta class; Bifunctional.
 
 0.826
CSIRO_2134
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.685
CSIRO_3947
Fe-S protein.
    
  0.641
CSIRO_1866
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.612
CSIRO_1865
CAIB/BAIF family protein; Belongs to the CoA-transferase III family.
       0.608
CSIRO_1029
Pterin-4-alpha-carbinolamine dehydratase.
 
  
 0.500
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
   
 0.474
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.463
CSIRO_1615
Aldehyde dehydrogenase/ coniferyl aldehyde dehydrogenase; Bifunctional; Belongs to the aldehyde dehydrogenase family.
   
 0.463
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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