STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1877Glutathione S-transferase. (222 aa)    
Predicted Functional Partners:
CSIRO_1876
Short-chain dehydrogenase.
 
     0.810
CSIRO_0180
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.795
CSIRO_0566
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.795
CSIRO_1878
Hypothetical protein.
       0.762
CSIRO_0161
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.713
CSIRO_0492
Glutathione S-transferase.
  
  
  0.675
CSIRO_1875
L-carnitine dehydratase/bile acid-inducible protein; Belongs to the CoA-transferase III family.
       0.636
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.604
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
 0.574
CSIRO_1874
Branched-chain amino acid transport ATP-binding protein.
       0.514
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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