Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1892Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein. (453 aa)    
Predicted Functional Partners:
CSIRO_1894
ABC transporter related protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.983
CSIRO_1893
Putative urea/short-chain amide transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.978
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.855
CSIRO_1895
Branched-chain amino acid transport ATP-binding protein.
 
 
  0.835
CSIRO_1871
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.823
CSIRO_1872
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.821
CSIRO_0063
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.750
CSIRO_0064
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.739
CSIRO_2144
ABC transporter substrate-binding protein.
  
  
 
0.722
CSIRO_2253
Branched-chain amino acid transport ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.716
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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