Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1911Nitroreductase. (225 aa)    
Predicted Functional Partners:
CSIRO_1512
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
 
 0.825
CSIRO_0738
Putative NADH oxidoreductase.
 
     0.646
CSIRO_2258
Fatty acid desaturase.
  
   
 0.565
CSIRO_1912
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.550
CSIRO_1217
Hypothetical protein.
  
  
 0.534
CSIRO_3640
Nitrate ABC transporter permease.
  
  
 0.534
CSIRO_4048
ABC-type multidrug transport system, permease component.
  
  
 0.534
CSIRO_1451
Hypothetical protein.
  
 
 0.514
CSIRO_1221
Hypothetical protein.
  
     0.492
CSIRO_1910
Hypothetical protein.
       0.492
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: medium (58%) [HD]