STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1928Hypothetical protein. (252 aa)    
Predicted Functional Partners:
CSIRO_1929
Hypothetical protein.
 
    0.953
CSIRO_1930
Hypothetical protein.
 
     0.952
CSIRO_1931
Hypothetical protein.
 
  
 0.932
CSIRO_1932
Hypothetical protein.
 
     0.931
CSIRO_2425
Biotin carboxylase.
  
 
 0.907
CSIRO_1927
Iron-sulfur cluster-binding protein.
 
     0.900
CSIRO_1935
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
  0.887
CSIRO_1933
Putative formate dehydrogenase-specific chaperone.
 
     0.876
CSIRO_3179
Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.851
CSIRO_1937
Formate dehydrogenase-O, gamma subunit.
 
     0.826
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.