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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1937Formate dehydrogenase-O, gamma subunit. (336 aa)    
Predicted Functional Partners:
CSIRO_1936
Formate dehydrogenase-O, iron-sulfur subunit.
 
 0.998
CSIRO_1935
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.994
CSIRO_1944
Tungsten-containing formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.949
tcuB
Protein TcuB.
  
 0.948
CSIRO_1927
Iron-sulfur cluster-binding protein.
 
  
 0.922
CSIRO_1933
Putative formate dehydrogenase-specific chaperone.
 
  
 0.906
CSIRO_1859
NAD-dependent formate dehydrogenase alpha subunit.
  
 
 0.873
CSIRO_2922
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.868
CSIRO_1931
Hypothetical protein.
 
     0.857
CSIRO_1929
Hypothetical protein.
 
     0.842
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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