STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1942Hypothetical protein. (125 aa)    
Predicted Functional Partners:
CSIRO_1941
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
     0.830
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
    
  0.648
CSIRO_2442
Scaffold protein for [4Fe-4S] cluster assembly; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
      0.528
CSIRO_1940
Hypothetical protein.
       0.526
hisE
phosphoribosyl-ATP pyrophosphatase.
    
  0.518
hisE-2
phosphoribosyl-ATP pyrophosphatase.
    
  0.518
CSIRO_3372
Hypothetical protein.
  
     0.504
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.467
apaG
ApaG protein.
  
     0.450
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
       0.429
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.