Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1953ABC transporter related protein. (263 aa)    
Predicted Functional Partners:
CSIRO_1955
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.974
CSIRO_1956
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.974
CSIRO_1952
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
  0.929
CSIRO_1954
Branched-chain amino acid transport ATP-binding protein.
 
 
 
0.915
CSIRO_2575
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.873
CSIRO_2574
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.862
CSIRO_0631
ABC transporter substrate-binding protein.
 
 
  0.861
CSIRO_0725
Hypothetical protein.
 
 
  0.861
CSIRO_1812
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
  0.861
CSIRO_2148
ABC transporter substrate-binding protein.
 
 
  0.861
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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