STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcuBProtein TcuB. (416 aa)    
Predicted Functional Partners:
tcuA
Flavoprotein TcuA.
 
 
 0.977
CSIRO_0729
Anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.975
CSIRO_1935
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.975
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.956
CSIRO_1937
Formate dehydrogenase-O, gamma subunit.
  
 0.948
CSIRO_1454
Membrane c-type cytochrome cy.
   
 0.935
CSIRO_2124
Cytochrome c2.
   
 0.935
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
 
 0.907
CSIRO_1927
Iron-sulfur cluster-binding protein.
  
 
 0.822
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
    
 0.818
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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