STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1972Regulatory protein PcaR. (265 aa)    
Predicted Functional Partners:
CSIRO_4229
Transcriptional regulator, IclR family.
  
     0.745
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
  
    0.684
CSIRO_1973
Putative exported protein.
 
     0.603
CSIRO_3987
Protocatechuate 3,4-dioxygenase beta chain.
 
   
 0.550
CSIRO_3986
Protocatechuate 3,4-dioxygenase alpha chain.
 
   
 0.540
CSIRO_1422
P-hydroxybenzoate hydroxylase.
  
   
 0.525
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
  
    0.484
CSIRO_1974
Hypothetical protein.
       0.480
CSIRO_1975
Hypothetical protein.
       0.480
CSIRO_1976
Hypothetical protein.
       0.474
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.