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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1975Hypothetical protein. (367 aa)    
Predicted Functional Partners:
CSIRO_1976
Hypothetical protein.
 
  
  0.963
CSIRO_1974
Hypothetical protein.
 
    
0.830
CSIRO_1973
Putative exported protein.
    
  0.755
CSIRO_1851
Glyoxalase family protein.
    
 0.727
CSIRO_1977
Putative dioxygenase ferredoxin protein.
    
  0.713
CSIRO_2176
Hypothetical protein.
 
  
 0.662
CSIRO_1684
Hypothetical protein.
 
  
  0.599
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.575
CSIRO_2926
Hypothetical protein.
    
 0.495
CSIRO_1972
Regulatory protein PcaR.
       0.480
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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