Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSIRO_1984Acetoacetate decarboxylase. (264 aa)    
Predicted Functional Partners:
CSIRO_1982
3-oxoacyl-(acyl-carrier protein) reductase.
    
  0.812
CSIRO_1983
3-hydroxyacyl-CoA dehydrogenase.
     
 0.777
CSIRO_1522
Ferredoxin reductase.
 
   
 0.742
CSIRO_1981
Putative hydroxyproline dehydratase; Belongs to the CoA-transferase III family.
    
  0.638
CSIRO_0350
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
    
 0.503
CSIRO_1980
glutaryl-CoA dehydrogenase.
       0.457
CSIRO_3035
hydroxymethylglutaryl-CoA lyase.
     
  0.444
CSIRO_0351
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
    
 0.430
CSIRO_0772
3-oxoadipate CoA-transferase subunit B.
    
 0.430
CSIRO_0773
3-oxoadipate CoA-transferase subunit A.
    
 0.430
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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