STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1992Major facilitator family transporter. (444 aa)    
Predicted Functional Partners:
CSIRO_4154
Dihydrodipicolinate synthase; Belongs to the DapA family.
  
  
 0.778
nanT
Sialic acid transporter NanT.
  
  
  0.649
CSIRO_1991
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase.
       0.594
CSIRO_1993
Acetyltransferase.
       0.531
pcaT
Dicarboxylic acid transporter PcaT.
 
     0.512
CSIRO_4042
Putative decarboxylase.
  
    0.484
CSIRO_0346
Ferric iron ABC transporter iron-binding protein.
  
  
 0.449
CSIRO_2256
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.433
CSIRO_0771
Putative sugar transport protein.
  
  
  0.429
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.423
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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