STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2002Urea ABC transporter, ATPase protein. (229 aa)    
Predicted Functional Partners:
CSIRO_2000
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.964
CSIRO_1999
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.957
CSIRO_1998
Urea ABC transporter, urea binding protein.
 
 
  0.929
CSIRO_2003
Formamidase.
 
     0.890
CSIRO_2001
Urea ABC transporter, ATPase protein.
 
  
 
0.867
CSIRO_2004
Putative regulatory protein.
 
     0.867
CSIRO_1996
Two-component response regulator.
 
  
  0.843
CSIRO_1481
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.825
CSIRO_1997
Two-component hybrid sensor and regulator.
 
     0.818
CSIRO_1479
Urea ABC transporter, urea binding protein.
 
 
  0.800
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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