Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_2003Formamidase. (409 aa)    
Predicted Functional Partners:
CSIRO_2004
Putative regulatory protein.
 
     0.911
CSIRO_2002
Urea ABC transporter, ATPase protein.
 
     0.891
CSIRO_1998
Urea ABC transporter, urea binding protein.
 
  
  0.887
CSIRO_2000
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.879
CSIRO_1999
Urea ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.847
CSIRO_2001
Urea ABC transporter, ATPase protein.
 
     0.846
CSIRO_1997
Two-component hybrid sensor and regulator.
 
     0.825
CSIRO_1203
Cobalt-containing nitrile hydratase subunit alpha.
     
  0.790
CSIRO_1204
Cobalt-containing nitrile hydratase subunit beta; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
     
  0.790
CSIRO_3740
Aerobic fumarate hydratase class 1; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.777
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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