Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_2015Carbamate kinase; Belongs to the carbamate kinase family. (321 aa)    
Predicted Functional Partners:
CSIRO_1259
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.978
CSIRO_2013
Putative cytoplasmic protein.
 
 
 0.969
CSIRO_2014
Putative oxidoreductase subunit.
 
  
 0.968
CSIRO_2012
Hypothetical protein.
 
  
 0.920
CSIRO_2011
Hypothetical protein.
 
     0.847
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.772
CSIRO_2209
NAD-specific glutamate dehydrogenase/ NADP-specific glutamate dehydrogenase; Bifunctional; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.706
CSIRO_2653
Glutamine synthetase.
     
 0.706
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
     
 0.701
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
     
  0.700
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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