Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_2023ABC-type transport system periplasmic substrate-binding protein. (425 aa)    
Predicted Functional Partners:
CSIRO_2025
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.968
CSIRO_2024
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.937
CSIRO_2153
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.924
CSIRO_2027
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
 
  0.906
CSIRO_2026
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
 
  0.891
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.877
CSIRO_2154
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.842
CSIRO_0064
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.841
CSIRO_0024
Branched-chain amino acid ABC-type transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.833
CSIRO_2084
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.829
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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