STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulose kinase. (508 aa)    
Predicted Functional Partners:
CSIRO_2138
Hypothetical protein.
  
  
 0.901
CSIRO_2032
Maltose operon transcriptional repressor MalR.
 
 
 
 0.842
CSIRO_2040
Glycerol dehydrogenase.
 
  
 0.832
CSIRO_3977
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.827
CSIRO_2515
Ribulose-5-phosphate 4-epimerase-like protein.
  
 
 0.817
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
0.796
CSIRO_3669
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.794
CSIRO_2270
2-dehydro-3-deoxygluconate kinase.
 
 
 0.763
CSIRO_2338
Ribulose-5-phosphate 4-epimerase-like protein.
  
 
 0.763
CSIRO_0357
Glycerol-3-phosphate dehydrogenase.
 
 0.753
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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