STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2040Glycerol dehydrogenase. (363 aa)    
Predicted Functional Partners:
CSIRO_2039
3-oxoacyl-(acyl-carrier protein) reductase.
    
  0.843
xylB
Xylulose kinase.
 
  
 0.832
CSIRO_2037
Maltose/maltodextrin ABC transporter, permease protein.
  
  
 0.806
CSIRO_2038
Maltose/maltodextrin ABC transporter, permease protein.
  
    0.801
CSIRO_0256
HAD superfamily protein; Involved in N-acetyl-glucosamine catabolism.
  
 
 0.751
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.717
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
     
 0.684
gpsA
Glycerol-3-phosphate dehydrogenase (NADP+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.679
CSIRO_0585
Phosphocarrier protein; Nitrogen regulation associated.
     
 0.665
CSIRO_2036
ABC transporter, periplasmic substrate-binding protein.
 
  
 0.664
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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