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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2057Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
CSIRO_2563
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.731
CSIRO_0737
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.704
CSIRO_1420
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.680
CSIRO_2642
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.675
CSIRO_3408
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.669
CSIRO_4184
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.593
CSIRO_0520
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.584
CSIRO_2058
Putative branched-chain amino acid transporter substrate-binding protein.
 
     0.582
CSIRO_2059
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.457
CSIRO_2060
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.457
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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