STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppBDipeptide transport system permease protein DppB. (337 aa)    
Predicted Functional Partners:
CSIRO_2069
Putative dipeptide ABC transporter.
 
 0.994
CSIRO_2070
Putative dipeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.987
CSIRO_2067
ABC transporter substrate-binding protein.
 0.983
CSIRO_2423
Putative glutathione transporter, permease component.
 
 0.978
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 0.975
oppF
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 0.974
CSIRO_2421
Dipeptide-binding ABC transporter, periplasmic substrate-binding component.
 0.946
CSIRO_1458
Oligopeptide transport system permease protein; Belongs to the ABC transporter superfamily.
 
 0.916
CSIRO_1457
Oligopeptide/dipeptide uptake family ABC transporter.
  
 0.880
CSIRO_2900
ABC transporter, periplasmic substrate-binding protein.
 
 
 0.814
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.