STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2078Isoquinoline 1-oxidoreductase alpha subunit. (162 aa)    
Predicted Functional Partners:
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
 0.986
CSIRO_1950
Carbon monoxide dehydrogenase large chain.
 0.977
CSIRO_0728
Carbon monoxide dehydrogenase large chain.
 0.970
CSIRO_0776
Carbon monoxide dehydrogenase large chain.
 
 0.960
CSIRO_0046
Carbon monoxide dehydrogenase large chain.
 0.959
CSIRO_3830
Xanthine dehydrogenase family protein, large subunit.
 0.956
CSIRO_2547
Carbon monoxide dehydrogenase large chain.
 0.954
CSIRO_1182
Isoquinoline 1-oxidoreductase beta subunit.
 0.927
CSIRO_3519
Isoquinoline 1-oxidoreductase beta subunit.
 0.916
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.865
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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