Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_2078Isoquinoline 1-oxidoreductase alpha subunit. (162 aa)    
Predicted Functional Partners:
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
 0.993
CSIRO_1950
Carbon monoxide dehydrogenase large chain.
 0.983
CSIRO_0728
Carbon monoxide dehydrogenase large chain.
 0.978
CSIRO_0046
Carbon monoxide dehydrogenase large chain.
 0.970
CSIRO_0776
Carbon monoxide dehydrogenase large chain.
 
 0.970
CSIRO_3830
Xanthine dehydrogenase family protein, large subunit.
 0.968
CSIRO_2547
Carbon monoxide dehydrogenase large chain.
 0.966
CSIRO_1182
Isoquinoline 1-oxidoreductase beta subunit.
 0.956
CSIRO_3519
Isoquinoline 1-oxidoreductase beta subunit.
 0.949
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.928
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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