STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2080Hypothetical protein. (306 aa)    
Predicted Functional Partners:
CSIRO_2079
Hypothetical protein.
 
     0.952
CSIRO_2081
Hypothetical protein.
 
     0.952
CSIRO_2082
Hypothetical protein.
 
     0.952
CSIRO_2087
Transcriptional regulator, MarR family.
 
     0.808
CSIRO_2088
Hypothetical protein.
 
     0.782
CSIRO_0058
Transcriptional regulator, MarR family.
 
     0.754
CSIRO_0050
Transcriptional regulator, MarR family.
 
     0.741
CSIRO_2084
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.710
CSIRO_2083
ABC transporter substrate-binding protein.
 
     0.705
CSIRO_2085
Branched-chain amino acid transport ATP-binding protein.
 
     0.671
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.