STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2088Hypothetical protein. (399 aa)    
Predicted Functional Partners:
CSIRO_2079
Hypothetical protein.
  
  
  0.909
CSIRO_2082
Hypothetical protein.
 
     0.786
CSIRO_2080
Hypothetical protein.
 
     0.782
CSIRO_2081
Hypothetical protein.
 
     0.782
CSIRO_0058
Transcriptional regulator, MarR family.
  
   
 0.593
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
    
  0.568
CSIRO_2084
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.555
CSIRO_2089
ferredoxin--NADP(+) reductase.
       0.529
CSIRO_0064
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.521
CSIRO_0050
Transcriptional regulator, MarR family.
  
   
 0.517
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.