STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2092Glycerol-3-phosphate ABC transporter. (424 aa)    
Predicted Functional Partners:
CSIRO_2091
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.964
ugpE
SN-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.953
ugpA
SN-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.947
CSIRO_2037
Maltose/maltodextrin ABC transporter, permease protein.
 
 0.867
malF-2
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.863
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.830
malF
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.818
malG-2
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.813
CSIRO_2038
Maltose/maltodextrin ABC transporter, permease protein.
 
 0.810
malK
Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.808
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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