Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_2100Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
CSIRO_4184
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.561
CSIRO_1420
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.536
CSIRO_0077
Regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.511
CSIRO_4072
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.491
CSIRO_0406
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.482
CSIRO_2642
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.452
CSIRO_0268
Glutamate synthase (NADPH) large chain.
     
 0.442
CSIRO_2057
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.428
CSIRO_2099
Transcriptional regulator.
     
 0.422
CSIRO_2563
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.406
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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