STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2106Lipocalin-like protein. (369 aa)    
Predicted Functional Partners:
soxS
Regulatory protein SoxS.
 
     0.899
soxW
Thioredoxin SoxW.
 
     0.860
soxZ
Sulfur oxidation protein SoxZ.
 
   
 0.784
soxY
Sulfur oxidation protein SoxY.
 
     0.778
soxA
Sulfur oxidation protein SoxA.
 
  
 0.776
soxD
Sulfite dehydrogenase cytochrome subunit SoxD.
 
  
 0.775
soxC
Sulfur oxidation molybdopterin protein SoxC.
 
   
 0.774
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.773
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
 
     0.763
soxR
Transcriptional regulator SoxR.
 
     0.727
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.