STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxVSulfur oxidation protein SoxV. (232 aa)    
Predicted Functional Partners:
soxW
Thioredoxin SoxW.
     
 0.748
soxS
Regulatory protein SoxS.
 
   
 0.673
soxR
Transcriptional regulator SoxR.
     
 0.539
tlpA
Thiol:disulfide oxidoreductase TlpA.
 
  
 0.521
ccmG
Cytochrome c-type biogenesis protein CcmG.
 
  
 0.516
ccmC
Cytochrome c-type biogenesis protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.473
CSIRO_0124
Hypothetical protein.
   
    0.442
CSIRO_2106
Lipocalin-like protein.
       0.438
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.