Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
soxBSulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family. (565 aa)    
Predicted Functional Partners:
soxZ
Sulfur oxidation protein SoxZ.
 
  
 0.985
soxC
Sulfur oxidation molybdopterin protein SoxC.
 
  
 0.984
soxD
Sulfite dehydrogenase cytochrome subunit SoxD.
 
  
 0.984
soxY
Sulfur oxidation protein SoxY.
 
  
 0.982
soxA
Sulfur oxidation protein SoxA.
 
  
 0.975
soxX
Sulfur oxidation protein SoxX.
 
  
 0.955
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
 
  
 0.916
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 0.861
CSIRO_0552
NADH pyrophosphatase.
    
  0.839
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
 0.826
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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